Output files

File name

Generating keyword

Brief description

Output mode

thermo.out

dump_thermo

Global thermodynamic quantities

Append

movie.xyz

dump_position

Trajectory (atomic positions, velocities etc)

Append

restart.xyz

dump_restart

The restart file

Overwrite

dump.xyz

dump_exyz

Atomistic positions, velocities and forces.

Append

observer.xyz

dump_observer

Atomistic positions, velocities and forces as evaluated with observing potentials.

Append

observer.out

dump_observer

Thermodynamic quantities evaluated with observing potentials.

Append

active.xyz

active

Structures selected through active learning.

Append

active.out

active

Simulation time and uncertainty during active learning.

Append

dipole.out

dump_dipole

Predicted dipole.

Append

polarizability.out

dump_polarizability

Predicted polarizability.

Append

velocity.out

dump_velocity

Contains the atomic velocities

Append

force.out

dump_force

Contains the atomic forces

Append

compute.out

compute

Time and space (group) averaged quantities

Append

hac.out

compute_hac

Thermal conductivity data from the EMD method

Append

kappa.out

compute_hnemd

Thermal conductivity data from the HNEMD method

Append

shc.out

compute_shc

Spectral heat current (SHC) data

Append

heatmode.out

compute_gkma

Modal heat current data from GKMA method

Append

kappamode.out

compute_hnema

Modal thermal conductivity data from HNEMA method

Append

dos.out, mvac.out

compute_dos

Phonon density of states (PDOS) data

Append

sdc.out

compute_sdc

Self-diffusion coefficient (SDC) data

Append

msd.out

compute_msd

Mean-square displacement (MSD) data

Append

cohesive.out

compute_cohesive

Cohesive energy curve

Overwrite

D.out

compute_phonon

Dynamical matrices \(D(\boldsymbol{k})\) for the input k points

Overwrite

omega2.out

compute_phonon

Phonon frequency squared \(\omega^2(\boldsymbol{k})\) for the input \(\boldsymbol{k}\)-points

Overwrite

viscosity_out

compute_viscosity

Viscosity and stress auto-correlation function

Append

onsager.out

compute_hnemdec

Onsager coefficients

Append

rdf.out

compute_rdf

Radial distribution function (RDF)

Append

mcmd.out

mc

Acceptance ratio and species concentrations

Append

lsqt_dos.out

compute_lsqt

Electronic density of states

Append

lsqt_velocity.out

compute_lsqt

Electron group velocity

Append

lsqt_sigma.out

compute_lsqt

Electrical conductivity

Append